Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHNIFYNRREFQMIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQLKVHIKEDKYS-----VVGKVATGNYSKVPWISIYDENITKETKDGYYLVYLFHPEGEGIYLSL--NQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYYAENKDSSYDLKNDYPSGYSHGSIRFKYYDLNEGFTEEDMLEDLKKFLELFNELASKVTKTSYDSLVNSIDEIQEDSEIEEIRTAQKDKTLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSNKENKLTGKVGEKLALNYFNELIDNKIDEDKKEQFRNILNDNPGSQHGHGYDLVAFDPTNTDKAVEKFIEIKTSTSSSIEEPFFMSLNEMFAMKEYKQKYLILRIFNVSGKEPQFYFIDPYAN-----YSEFKDVDDLIDKVFNVEAIQYKVFGEK |
| 4O5J Chain:A ((27-400)) | -LKNLNEKYEQLSQYLNQVASLKQSIQNANN--------------IELVNSSL-NYLKSFTNNNYNSTTQSPIFNAVQAVITSVLGFWSLYAGN--------YFTFFVGKKVDSGQPASVQGNPPFKTIIENCSGIENCAMD---------------------QTTYDKMKKLAEDLQAAQTNSATKGNNLCALSGCAA--TSNPPNSTVSNALNLAQQLMDLIANTKTAMMWKNIVISGVSNTSGAITSTNYPTQYAVFNNIKAMIPILQQAVTLSQSNH-TLSASLQAQATGSQTNPKFAKDIYTFAQNQKQVISYAQDIFNLFNSIPAEQYKYLEKAYLKIPNAGSTPTNPY-------------RQVVNLNQEVQTIKNNVSYYGNRVDAALSVARDVYNLKSNQAEIVTAYNDAKTLSEEISKLPH------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 77279 for 2801 contacts (27.6/contact) +
2D Compatibility (PS) -37090 + (NN) -7220 + (LL) 4136
1D Compatibility (HY) -6000 + (ID) 2900
Total energy: 28205.0 ( 10.07 by residue)
QMean score : 0.120
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