Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDHERTRENYDLKNDKNIDYNERVKEIIESQKTGTRKTRKDAVLVNELLVTSDRDFFEQLDPGEQKRFFEESYKLFSERYGKQNIAYATVHN--DEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWLQDKFPEHMKKQGFELKRGERGSDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVKSDLEVPAKRHMKSVEVPTGEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDNDRLKQHVRNLMSTD-----MAREYKKLSKEHGQVKEKYSGLVERFNENVNDYNELLEENKSLKSKISDLKRDVSLIYESTKEFLKERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNEFELTHNREVKKERSRDQGMSL
4P5W Chain:A ((31-394))--TKRADPAELRTIFLKYASIEKNGEFFMSPNDFVTRY-----LNIFSQPNPKTVELLSGVVDQTKDGL-ISFQEFVAFESVLCAPD-------------ALFMVAFQLF-DKAGKGEVTFEDVKQVFGQTTIHQHIP--------------FN-----WDSEFVQLHFGKER-----------KRHLTYAEFTQFLLEIQLEHA-KQAFVQRDN--ARTGRVT-------AIDFRDIMVTIRPHVLTPFVEECLVAAAGGTTSHQVSFSYFNGFNSLLNNMELIRKIYSTLAGTRKDVEVTKEEFVLAAQKFGQVTPMEVDILFQLADLYEPRGRMT-------------LADIERIAPPNPD----HVGGYKLAVATFAGIENKF------------------------------------GLYL


General information:
TITO was launched using:
RESULT:

Template: 4P5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 81690 for 2319 contacts (35.2/contact) +
2D Compatibility (PS) -31895 + (NN) -11653 + (LL) 6988
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: 29980.0 ( 12.93 by residue)
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_4P5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P5W-query.scw
PDB file : Tito_Scwrl_4P5W.pdb: