Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MNYFRYKQFNKDVITVA-VGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPI----------LYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDA---EGHTLDIWLRKQRDNHS-------AYAFIKRLIKQFGKPQKVIT-----DQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQ----DHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
| 3G40 Chain:A ((492-760)) | WKANLLVPVEDPRELMGTFDFLRDITYPKGSVKLLGLADKENLLSQLPSISEGFQEEGVFSSWTIIEENLVVGMEALTGSFFRPSILFLRLPENRDRDEEIREIIRKASMYRMGVLLFSKHPQAGLGRQNLINLWIENRWDISMELGNMDLALLIAYKLKSNWKASLSFMTFAPTAIQAQAAENFLQSLAELARIPNVKMQVLRENPIKSSKLPFASLHIFSLDPNPDLDLARHLMEKAGSSCIFALDSGEENALALL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50239 for 1488 contacts (-33.8/contact) +
2D Compatibility (PS) -22715 + (NN) -1984 + (LL) 876
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -79262.0 ( -53.27 by residue)
QMean score : 0.220
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