Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHH-YYQPLWTLVGAGVSSL-K-SSRKDMESVIP-EGANW-IKQAVSSFQPENNSVILG-----DNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFD--VGKYNKELERIVEERNITVNYNYNLVEIDGDKKV-ATFEHIKAYDRKTISYDMLHVTPPMGPL-DVVKESTLS-DSEGWVDVNPTTLQHKSYSNVFALGDASNVPT--------SKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 3CGB Chain:A ((37-354)) | ----MNYVIIGGDAAGMSAAMQIV--RNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDL----QGVHLLKTIPDAERILKTLET--------NKVEDVTIIGGGAIGLEM--AETFVELG----KKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-----KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNA-YMQ-TNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKR----------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142668 for 2432 contacts (-58.7/contact) +
2D Compatibility (PS) -32304 + (NN) -12573 + (LL) 6596
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -193299.0 ( -79.48 by residue)
QMean score : 0.473
|
|
|