Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKA-D---NGGAQTHLIQLANHFCV-HHDVYVIVGN-HGPMIEQL---------------------DARVNVIILEHLVGP------I---DF---KQ---DIL-A----VKVLAQLFSKIKPDVIHLHSSKAGTVG-RIAKFISKSKDTRVVFTAHGWAFTEGVK-----------------PAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKY----RF--------NRLKLTTIHNGIADVPAVKQTLK--------------SQSHNNIGEVVGMLPNKQDLQIN--APTKHQFVMIARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPT--LNDCQQQVVQAGLENDVTFLGNVI-NASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVAD-----------NGICMMNNQPETIAKVLEKYLI---DSDY-IKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 2QZS Chain:A ((1-477)) | MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRP---AKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQ--------IA--MGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLL--EQ-GGQLALLGAGDPVLQEGFLAAAAEYPGQVGV-QIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQ---RQAMAMDFSWQVAAKSYRELYYRLK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194372 for 3111 contacts (-62.5/contact) +
2D Compatibility (PS) -39279 + (NN) -12608 + (LL) 916
1D Compatibility (HY) -7200 + (ID) 2600
Total energy: -255143.0 ( -82.01 by residue)
QMean score : 0.443
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