Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLIGLVIVALVLLAACGSNNDKKVTIGVASN-DTKAWEKVKELA-KKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLAK |
3TQW Chain:A ((4-239)) | ------------------------MVRVGTIAGPETQLMEVAKQVALNRYGLHVNIITFSDYNTPNEALADGSVDANMFQHLPYLKAQIEMR-GYKIVSIGKTFVYPMGLYSKKITALTQLKTGAKIAVPSDPSNEARALLLLEKAQLIQLKTH--INATPMDIASNPKKLKIVELDAAQLSRSLGDVDLAAINTNYAIPAGLSPSRDALLTEG----PNSPYANVVAVREDDKNDPRLKQLVSALHSPAVLSAAKKIFGDGAIP----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57133 for 1961 contacts (-29.1/contact) +
2D Compatibility (PS) -26167 + (NN) -20681 + (LL) 3472
1D Compatibility (HY) -15600 + (ID) 4800
Total energy: -120909.0 ( -61.66 by residue)
QMean score : 0.544
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