Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNLISIIIILCLTLSIMTPYAQATNSDVTPVQAANQYGYAGLSAAYEPTSAVNVS-QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHFVNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTH--AVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRIN-G----KKYYVENDLYDVLPSDFSKKDYKLVVEDGKVHADYPREFINKDYGPPTVEVHQPIIQKANTVAKSMWEEHPLFTIIGGACLVAGLALIVHMIINRLFRKRK
3MFD Chain:A ((4-281))-------------------------------------------AIDVSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLAIES---G--KMDQTVTVSANAVRTE----GSAIYLTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDH-------------ENHYSTAYDMAILTKYAMKL-KDYQKISGTKIYKAETMESVWKNKNKLLTM---LYPYSTGGKTGYTKLAKRTLVSTASKDGIDLIAVTINDP---------NDWDDHMKMFNYVFEHYQTYLIAKKGDIPKLKGTFYESKAFIKRDITYLLTEEEK-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3MFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55927 for 2364 contacts (-23.7/contact) +
2D Compatibility (PS) -28806 + (NN) -11135 + (LL) 11820
1D Compatibility (HY) -10000 + (ID) 3650
Total energy: -97698.0 ( -41.33 by residue)
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_3MFD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MFD-query.scw
PDB file : Tito_Scwrl_3MFD.pdb: