Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFK---LLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQA-MSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4CLM Chain:B ((33-244))
---------------------EALAYREATFDILEWRVDHFMDIASTQ--SVLTAARVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKA---TVDYAHAHNVYVVMSNHDFHQTPSAEEMVLRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQASAPGQIAVNDLRS-----
General information:
TITO was launched using:
RESULT:
Template:
4CLM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108569 for 1641 contacts (-66.2/contact) +
2D Compatibility (PS) -22245 + (NN) -11561 + (LL) 3732
1D Compatibility (HY) -14000 + (ID) 3700
Total energy: -156343.0 ( -95.27 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_4CLM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CLM-query.scw
PDB file :
Tito_Scwrl_4CLM.pdb
: