Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKVSDLRLKYPNGQRKIFDHLNITIQDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIVD---------------PLSGVIFQDPDSQFC-MPKVYEELAFVLENRQVPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWE--DQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQKYVHL-----LSEYGVWHPRAW---EFAP---SRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV |
| 1OXX Chain:K ((3-310)) | RIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVP-----STGELYFDDRLVASNGKLIVPPEDRKIGMVFQTW--ALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGK-LVQVGKPEDLYDNPVSIQVASLIGEINE-LEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLS-KDVIKDDSWILVGKGKVKVIGYQGGL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152330 for 2032 contacts (-75.0/contact) +
2D Compatibility (PS) -29773 + (NN) -9759 + (LL) 13508
1D Compatibility (HY) -13600 + (ID) 2600
Total energy: -194554.0 ( -95.75 by residue)
QMean score : 0.363
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