Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDERAMDSNDIERERGITILAKNTAVDYKGTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLKPVVV-VNKIDKPSARPEGVVD--EVLDLFIELEAND--EQLEFPVVYASAVNGTASLDPEKQD-------------DNLQSLYETIIDYVPAPIDNSDEPLQFQVALLDYNDYVGR--IGIGRVFRGKMRVGDNVSLIKLDGTVKNFRVTKIFGYFGLKRLEIEEAQAGDLIAV----SGMEDINVGE------TVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQIQERLNQQLETDVSLKVSNTDSPDTWVVAGRGELHLSILIENMRREGYELQVSKPQVIIKEIDGVMCEPFERVQCEVPQENAGAVIESLGARKGEMVDMTTTDNGLTRLIFNVPARGMIGYTTEFMSMTRGYGIINHTFEEFRPRIKAQIGGRRNGALISMDQGSASTYAILGLEDRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKTKHQTNVRSATKDQTQTMNRPRILTLEEALQFINDDELVEVTPESIRLRKKILNKNVREKEAKRIKQMMQENE |
| 1HA3 Chain:B ((13-318)) | ---------NVGTIGHVDHGKTTLTAALTFVTAAENPN-----------------------AHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVD--------MVDDPELLDL-VEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKP--FLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGV----EMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94292 for 1909 contacts (-49.4/contact) +
2D Compatibility (PS) -26857 + (NN) -6054 + (LL) 24848
1D Compatibility (HY) -13200 + (ID) 4550
Total energy: -120105.0 ( -62.92 by residue)
QMean score : 0.501
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