Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQ--STSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAELWE-ESGRWGAYGPELMRLQDRH----GRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFI-MKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHSTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKK--DDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK |
| 1NJ8 Chain:A ((8-378)) | ----------------------SDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKRP---------------------------------EWDKF------------------------------------------------------------------------PGA--------------------EYTMA--------------------------------------F------D-------TIFPD-------GRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNNI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127989 for 2910 contacts (-44.0/contact) +
2D Compatibility (PS) -38184 + (NN) -3177 + (LL) 13240
1D Compatibility (HY) -25600 + (ID) 4600
Total energy: -186310.0 ( -64.02 by residue)
QMean score : 0.489
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