Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVETEGQASTESEE
1KQ1 Chain:I ((6-65))
-----NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTV------------
General information:
TITO was launched using:
RESULT:
Template:
1KQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32536 for 377 contacts (-86.3/contact) +
2D Compatibility (PS) -6655 + (NN) -1671 + (LL) 1240
1D Compatibility (HY) -9200 + (ID) 3000
Total energy: -51822.0 ( -137.46 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_1KQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KQ1-query.scw
PDB file :
Tito_Scwrl_1KQ1.pdb
: