Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKY-RNVFIEAQNKAKQQKLNIWSK |
1STY Chain:A ((9-142)) | ---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRGKSEAQAKKEKLNIWS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1STY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2214 for 1025 contacts (2.2/contact) +
2D Compatibility (PS) -13724 + (NN) -4353 + (LL) 3588
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -24025.0 ( -23.44 by residue)
QMean score : 0.455
|
|
|