Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSL---------NTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANV-DDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH |
3Q1O Chain:D ((43-273)) | -----------------------------LEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEY---FKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL-SNALLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKT--THLDSAKNSFVNLLGLERANN------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31675 for 1732 contacts (-18.3/contact) +
2D Compatibility (PS) -24069 + (NN) -12947 + (LL) 5280
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -88211.0 ( -50.93 by residue)
QMean score : 0.387
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