Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAEKITQGTEGLNVPNEPIIPFIIGDGIGPDIWKAASRVIDAA-VEKAYNGEKRIEWKEVLAGQKAFDT-TGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSFKQWGYDLALSEFGDQVFTWQQYDEIVENEGRDAANAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTI-ASKVVTYDFARLMDGAEEVSTSAFADELIKNLK |
| 2D1C Chain:B ((21-355)) | -------------------LITVIPGDGIGPECVEATLKVLEAAKAPLAY------EVRE--AGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGYGEKSANVTLRKLFETYANVRPVREFPNVPTPYAG-RGIDLVVVRENVEDLYAGIEHMQ-TPSVAQT----------------------LKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLK-----------------------------RAFEQVAQEYPDIEAVHIIVDNAA----HQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNEV--AIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRYLEEFATADLIENALLYTLEEGRVLTGDVVGYDRGAK---TTEYTEAIIQNL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102726 for 2970 contacts (-34.6/contact) +
2D Compatibility (PS) -35996 + (NN) -7537 + (LL) 4664
1D Compatibility (HY) -24800 + (ID) 7150
Total energy: -173545.0 ( -58.43 by residue)
QMean score : 0.501
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