Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAI----KILEDMNV-DWKKRIHMIIGTDEESDW-KCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTT-----NIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARNL-DKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE |
| 2RB7 Chain:A ((3-360)) | -------SSMQHIVELTSDLIRFPSMHSRP---------EQISRCAGFIMDWCAQNGIHAERMDHDGIPSVMVLPEKGRAGLLLMAHIDVVDAED----DLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPL-------I--RADY-VVALD------------------------------------GGNP----------QQV--------------ITKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFAEE----N--------------------EDHWHRTVNLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG---TVSIVR-TVPVFLAADSPYTERLLALSGAT------AGKAHGASDARYLGENGLTGVVWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLAREMEE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112347 for 2916 contacts (-38.5/contact) +
2D Compatibility (PS) -36893 + (NN) -15048 + (LL) 8140
1D Compatibility (HY) -8000 + (ID) 3150
Total energy: -167298.0 ( -57.37 by residue)
QMean score : 0.348
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