Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPG------------------TNEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQ--VSIKPVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPL----------MNAQILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
| 4GQG Chain:A ((15-299)) | -----------MPIVGLGTWKSPLGK-VKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110399 for 2135 contacts (-51.7/contact) +
2D Compatibility (PS) -27425 + (NN) -10031 + (LL) 340
1D Compatibility (HY) -29600 + (ID) 6000
Total energy: -183115.0 ( -85.77 by residue)
QMean score : 0.417
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