Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIPKRKKDEYRELMIPNMALKNIQRWILDNVL-----YRRQVHKCATGFVP------RKSIVNNAIPHVGQKYILKMDIENF-FPSITFKQVRKIFSEMGYKFELATALANLCTVNNQLPQGA---------PTSPYIANIIFYNIDKRIFSYCQKNNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINESKTIMFKPGDRKKVTGIIVNEKI---------SVPKTLIREVRKQIYFVNKFGLEEHLIRNNYS----LDYEQQFIMSIYGKISFIKMIDFKKGVSLQKKFNEVLGNIES------SNMYRDNIDFDDIELHWIN----------------------------- |
| 1FP3 Chain:A ((1-402)) | MEKERETLQAWKERVGQELDRVMAFWLEHSHD-----REHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLPGAVASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKGGPFKGCFHVPRCLAMCEEMLSALLSRLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32912 for 2661 contacts (-12.4/contact) +
2D Compatibility (PS) -33373 + (NN) 448 + (LL) 520
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -69817.0 ( -26.24 by residue)
QMean score : 0.188
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