Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIPKDPKRIAVVAPTYAGGLKKLGANIVAVNQQVDQSK---VLK---DKFKGVTKIGDGDVEKVAKEKPDLIIVYST--DKDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWEETTAKDGKEIKKAIG--QDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQK-LT-AKAGWAEVKQEEIEKYAGDYIVSTSEGK----------PTPGYESTNMWKNLKATKEGHIVK-VDAGTYWY-NDPYTLDFMRKDLKEKLIKAAK |
| 3MWF Chain:A ((5-295)) | -----------------------------TTSIKHAMG-TTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTV-FKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAG-G--YAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41880 for 2233 contacts (-18.8/contact) +
2D Compatibility (PS) -28501 + (NN) -5381 + (LL) 2636
1D Compatibility (HY) -6000 + (ID) 3250
Total energy: -82376.0 ( -36.89 by residue)
QMean score : 0.449
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