Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSAKYKSEQ---LILDERNFESLMRQFDF-EAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
1SHS Chain:A ((33-147))
-TGIQISGKGFMP------------------------ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKFENGVLSVILPK----AESSIKKGINIE
General information:
TITO was launched using:
RESULT:
Template:
1SHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43166 for 682 contacts (-63.3/contact) +
2D Compatibility (PS) -11626 + (NN) 743 + (LL) 820
1D Compatibility (HY) -8400 + (ID) 1800
Total energy: -63429.0 ( -93.00 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1SHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SHS-query.scw
PDB file :
Tito_Scwrl_1SHS.pdb
: