Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQASQKL--GVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEVYQTNVFGIVRMMNTFVPLLEKS-EQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSSKSAVTMLTLQYAKGLP--NMQINAADPGATNTDLVGDF----------S--------------NNSKHVSEGIKPIIQLATIGADGPTGTFIN-GDGEMPW |
| 3WDS Chain:A ((12-259)) | -GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPA-VDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96069 for 1960 contacts (-49.0/contact) +
2D Compatibility (PS) -23527 + (NN) -5145 + (LL) 860
1D Compatibility (HY) -3200 + (ID) 3000
Total energy: -130081.0 ( -66.37 by residue)
QMean score : 0.533
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