Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGG-------NKDKREYFENATAQIGAKLLVCDIREQFFNDVLFKP--KYGYGKYFNPCIDCHAN-MFRNAFY-KMLELDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQASGEKPQFLDELLLRPMSAKLLEPTFMEKKGWVDREKLLDVSGRGRARQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYR-E-MVFEDGVIVKNGRYF-----------V--LP------HNARLVVARNEEENHKLDIEH-PLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA |
| 2DER Chain:A ((17-326)) | --AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGK---S-------------------RLLRGLDSNKDQS---YFLYTLSHEQIAQSLFPVGEL------------EKPQVRKIAEDLGLV--------------KFREFLGRYLPAQPGKIITVDG--DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT--GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46166 for 1822 contacts (-25.3/contact) +
2D Compatibility (PS) -27271 + (NN) -1577 + (LL) 4124
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -81140.0 ( -44.53 by residue)
QMean score : 0.343
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