Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRFISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFNKPKNEKYLRPLILKSPVVSGIERVKHPTQKSLTLMEKIISTHT-NPNDTVLDPFMGSGTTGLACKNL--------------KRNFIGIESEKEYFQIAQKRLS |
2OKC Chain:A ((157-228)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSSKEKRDFLRDKALHGVDNTPLVVTLASMNLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7102 for 329 contacts (-21.6/contact) +
2D Compatibility (PS) -6098 + (NN) -2956 + (LL) 12640
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -8466.0 ( -25.73 by residue)
QMean score : 0.530
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