Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRIGYGNIKDMILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVESGECSKAFKGMLPPKGRHWRTDIATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQYPSYPTEKNAQLLDLIIKTSSNKDSIVLDCFCGSGTTLKSAFLLQRKFIGIDNSDLAIQACKNKLETITKDLFV--SQNFYDFLVF |
1EG2 Chain:A ((36-314)) | GTTRHVYDVCDCLDTLAKLPD----DSVQLIICDPPY----------------------NIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQ--------------GEAGSGDLISIISHMRQNSKMLLANLIIWNYPNGM-------------SAQ-------RFFANRHEEIAWFAK--------TKKYFFDLDAVREPYDEETKAAYMKDKRLNPESVEKGRNPTNVWRMSRLNGNSLERVG--------HPTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLRSYEIVEGAANFGAALQR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -84900 for 2129 contacts (-39.9/contact) +
2D Compatibility (PS) -28480 + (NN) -12585 + (LL) 3076
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -131539.0 ( -61.78 by residue)
QMean score : 0.278
|
|
|