Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSTRIGSKIVMMVCAVVIVISAVMGVIISYKVESVLQSQATELLQKKAQLVSFKIQGIMKRIFMGANTLERFLSDENGAINDTLKRRMLSEFLLANPHVLLVSAIYTNNNERMITAMNMDSKIAYPNTALNENMTNQIHSLKSITRSDPYYKEVNGDKIYGMDITLPLMGKNQNVIGALNFFLNIDA--FYTDVVGKKKSNTFLMGKDG----RILINPNREIQDKILSAINPD--KRVAKAVEYYNQNEA-GTLSYHSLSGNTETFLAIQPFDFFEEKGNNGNHWRWAIGK----YVNKSLVFKEATNTKFIIITTLILGVLVLAFLVFIIISNLITKRISRVNNTLNDFFNLLNNPKNNHAISLTPPSAYDEIGQMQASINENILKTQESIQADNKAIQNSIEVTNYVENGDFTQEIACVPKNKDLQALRNTINSIIQYFRNQIGADIESLNNALEHYKNLDFTHHIQNPKANMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLEEITNIITMIDSKSQEMISQGEDIKSVVDMIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSIADNAESIKMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSTKIDGISQDILEDVSKKKF |
| 4O5J Chain:A ((27-400)) | ---------------------------------------------------------------------------------------------------LKNLNEKYEQLSQYLNQVASLKQSIQNANN--IELVNSSLNYLKSFTNNNYNSTTQS-----------PIFNAVQAVITSVLGFWSLYAGNYFTFFVGKKVDSGQPASVQGNPPFKTIIENCSGIENCAMDQTTYDKMKKLAEDLQAAQTNSATKGNNLCALSGCAAT--SNPPNSTVSNALNLAQQLMDLIANTKTAMMWKNIVISGVSNTSGAITSTNY----PTQYAVFNNIKAMI-PILQQAVTLSQSNHTLSASLQAQATGSQTNPKFAKDIYTF-AQNQKQVISYAQDIFNLFNSI--PAEQYKYLEKAYLKIPNAGSTPTNPYRQVVN-LNQEVQTIKNNVSYYGNRVDAALSVARDVYNLKSNQAEIVTAYNDAKTLSEEISKLPH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4O5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -47380 for 2746 contacts (-17.3/contact) +
2D Compatibility (PS) -36187 + (NN) 3933 + (LL) 25764
1D Compatibility (HY) -5600 + (ID) 3400
Total energy: -62870.0 ( -22.90 by residue)
QMean score : 0.305
|
|
|