Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDILKTLQKHLGDVETSDFKTNAIEKSQQIAKFSRDMKNINESVGALQVLQIACKKLLNKSMGLEDKDALQASIIKQELREIVENCQFLASPLFDTQLNIAINDEVFSMIVDNPLNLLENVGGFQAYLEEKLN-EIKELLGYLSESLSNPKAFMPKQSFSNKSLKDLLSDDLRA |
1U6T Chain:A ((1-121)) | --VIRVYIA-------SSSGSTAIKKKQQDVLGFLEANKI----------------------GFEEKDIAANEENRKWMRENVPENSRPATGYPLP-----------PQIFNES----QYRGDYDAFFEARENNAVYAFLGLTAPPGSKEAEVQAKQQALEHHHHHH------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12464 for 789 contacts (15.8/contact) +
2D Compatibility (PS) -12364 + (NN) 1416 + (LL) 4348
1D Compatibility (HY) 800 + (ID) 1250
Total energy: 5414.0 ( 6.86 by residue)
QMean score : 0.242
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