Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCRVYYEDTDSEGVVYHANYLKYCERARSEFFFKQNV--LPENEEGVFVIRSIKADFFTPASLGQVLEIRTQIKELRKVFVVLFQEIYCIQNASLEPMKPFKVFASEIKFGFVNRSTYSPIAIPKLFKELLSAV
3R87 Chain:A ((8-131))
-PVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSDKLATLWNDHGLGFAVYKANMIFQDGVEFAEICDIRTSFTLDGKYKTLWRQEVWRPG-------ASRAAVIGDIEMVCLDKE-KRLQPVPADILASMMA-
General information:
TITO was launched using:
RESULT:
Template:
3R87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93817 for 858 contacts (-109.3/contact) +
2D Compatibility (PS) -13024 + (NN) -2455 + (LL) 788
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -117608.0 ( -137.07 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_3R87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R87-query.scw
PDB file :
Tito_Scwrl_3R87.pdb
: