Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELTQNKNSALQKAMQEKGVENSDKSPDAKMPEDIYCKQITLESMLETTDAFQASCIAIALKSKIRDFDKIPIQTFKPLQEKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALAKSNATQSNAQTFFILGINEILHKKTSKALKYFERSEAVVKDDDFSKDRAIFWQYLASKKKKTLEHLSQSPALNLYSLYASRKLKTTPSYRIISHIQNLSQENPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNTDERAMAYAIARQESFLLPALIS---RSFALGLMQIMPFNVGPFAKSLGMDNV-DLNDMFNPNIALKFGNYYLNHLKKEFNHP---LFVAYAYNAGPGFLRRWLESSKRFKGKNHFEPWLSMELMPYSETRMYGFRVMLNYLIYQEIFGNFIPIDAFLEQTLNSKDKP |
| 1QSA Chain:A ((451-618)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAYNDLFKRYTSGKEIP-QSYAMAIARQESAWNPKV--KSPVG-ASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFG--NNRIFSSAAYNAGPGRVRTWLGNSA-----GRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGD--KPTLMSATEWGRRY-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108499 for 1278 contacts (-84.9/contact) +
2D Compatibility (PS) -16432 + (NN) -1244 + (LL) 29824
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -106251.0 ( -83.14 by residue)
QMean score : 0.337
|
|
|