Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILE-VAFSISNDVHLVLHHQQERIKEAVSKRFK--GVIFHAQIVEKYSGTGGAIMQENKTPIPTQHE-RVLILNADMPLITKDALTPLLESH---NNAIGLLH--LADPKGYGRVI-LENHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAIFLEEECFL-GVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYLEKGVSFKGECVLEQGVRLIGN------CLI-ENARIKAYSVIEESQIINS-----------SVGPFAHARPKSVI-CDSHVGNFVETKNAKL-QGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP |
3D8V Chain:A ((8-466)) | --AVLVLAAGPGTRMRSDTPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLC-GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYD-TSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVPPGALAVSAGPQRNIENWVQR--KRP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280502 for 3438 contacts (-81.6/contact) +
2D Compatibility (PS) -47397 + (NN) -20851 + (LL) 580
1D Compatibility (HY) -26800 + (ID) 7500
Total energy: -382470.0 ( -111.25 by residue)
QMean score : 0.495
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