Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVRFFGPIKEE------NFFIKANGLKELRAILQEKEGLKEWL---GVCAIALNDHLIDNLDMP---LKDGDVISLLPPVCGG
1FM0 Chain:D ((1-81))
MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLVS----FDHPLTDGDEVAFFPPVTGG
General information:
TITO was launched using:
RESULT:
Template:
1FM0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44074 for 409 contacts (-107.8/contact) +
2D Compatibility (PS) -7924 + (NN) -3667 + (LL) 228
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -60837.0 ( -148.75 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_1FM0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FM0-query.scw
PDB file :
Tito_Scwrl_1FM0.pdb
: