Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MVLEVKNLSFKYSQKL-ILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIKACNKDILPLKPYEKAKLIAYIPQVEYYAFNFSVLDFVLMGKATHLNLFAMPKAKHIKEATSVLERLDLESLKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFFDAIKDEMKKRELSVLVNIHDPNLVARHSTHVVMLKDKKLFLQASTPIAMTSHNLSALYDT------PLEAIWHDDKLVVYAL----------------------------------------------------------------------------------------- |
| 1Z47 Chain:A ((11-355)) | GSMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGL-ERPTKGDVWIGGKRVTDLPPQKRN--VGLVFQNYALFQHMTVYDNV----SFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLH-EGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154909 for 1932 contacts (-80.2/contact) +
2D Compatibility (PS) -26366 + (NN) -6888 + (LL) 616
1D Compatibility (HY) -10000 + (ID) 2850
Total energy: -200397.0 ( -103.73 by residue)
QMean score : 0.419
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