Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------MTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVA-----FVIILVCIQNFSSIMLSGDEYKLIDPS--KVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAP----YMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIR--HNDIRLTMCVGILSNIMLLVANF----SVYFFMGNRKNSGANLARMILWVLQ-IILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI |
| 4AW6 Chain:A ((2-472)) | GMWASLDALWEMPAEKRIFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDA-IKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLT-KVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDSQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKL-GKAKDLYSALIKLNKD--NLGFPVSD---------WLFSMWHYSHPPLLERLQALKTM-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125239 for 1972 contacts (-63.5/contact) +
2D Compatibility (PS) -31084 + (NN) -13210 + (LL) 896
1D Compatibility (HY) -21200 + (ID) 2650
Total energy: -192487.0 ( -97.61 by residue)
QMean score : 0.321
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