Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSVIIIESPNKVAKIREITGA--KVFATIGHFMQLKS----YDENNGFKPTFDYDQEKKKHIFEMIEACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQNALLFENTNRQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREIEKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKACLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFE--------AGLITYIRTDAESLSVEFLDETESFYAPIYKDLYLKREYKAGKQSQAEAHEAIRITH-PHTTEDLESIVYNANITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNE--YFKCSVKGLKSAGFLAMFSKKELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLSTIKRNAPSAYKEADFVKLLENKGIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQMEEVLDEIVENKSSYVDFISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNLSEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEILAKKHNVKLPKGFKYSMKVCGDFINEYHKK |
| 2GAI Chain:A ((7-601)) | ---KYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNT-LGRKNRIVFSEITPRVIREAVKNP---REIDMKKVRAQLARRILDRIVGYSLSPVLWRNFK--SNLSAGRVQSATLKLVCDREREILRFV-----PKKYHRITVNFDG-----LTAEIDVKEKKFFDAETLKEIQS-------IDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEVF-----------GEEYV-GAHEAIRPTNVFMTPEEAGKYL------NSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVW----------------KTERNTGEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKKI---RGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSS-----VFDRNDRIVVDFPTNQKCSCGKEMRLSFG---------------------KYGFYLKCECGKTRSVKNDEIAVIDDGKIFL--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143582 for 4604 contacts (-31.2/contact) +
2D Compatibility (PS) -58721 + (NN) 2931 + (LL) 8264
1D Compatibility (HY) -29600 + (ID) 8300
Total energy: -229008.0 ( -49.74 by residue)
QMean score : 0.376
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