Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSLSYVSKKFLSVLLLISLFLSACKSNNKDKLDENLLSSGTQSSKELNDKRDNIDKKSYAGLEDVFLDNKSISPNDKYMLLVFGRNGCSYCERLKKDLKNVKELRNYIKEHFSAYYVNISYSKEHNFKVGDKDKNDEKEIKMSTEELAQIYAVQSTPTIVLSDK---TGKTIYELPGYMPSVQFLAVLEFIGDGKYQDTKNDEDLTKKLKAYIKYKTNLSKSKSS |
1A8L Chain:? ((1-119)) | ---------------------------------------------------MGLISDADKKVIKEEFFSK---MVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFD------------------------TPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46985 for 815 contacts (-57.7/contact) +
2D Compatibility (PS) -12499 + (NN) -4092 + (LL) 4456
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -66120.0 ( -81.13 by residue)
QMean score : 0.559
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