Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLENVKKSLFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKENSGCFNLGVLYYQGHGVEKNLK---KAASFYSKACDLNYSNGCHLLGNLYYSGQG--VSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTR---DFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAAKNFKEALARYSKACELENGGGCFNLGAMQYNGEGATRNEKQAIENFKKGCKLGAKGACDILKQLKIKV |
| 3E4B Chain:A ((160-390)) | --------------------------------------------HLDDVERICKAALNTTDICYVELATVYQK----KQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWVSLAQLLYD----FPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAHFEKAVGRE-VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTPEANDLATQLEAPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20041 for 1752 contacts (-11.4/contact) +
2D Compatibility (PS) -23110 + (NN) -8780 + (LL) 3148
1D Compatibility (HY) -1200 + (ID) 1750
Total energy: -51733.0 ( -29.53 by residue)
QMean score : 0.365
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