Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGYASKLALKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNG--ESLAYILLGIMYENGRGVPKDYKKAVEYFQKAVDN--DIPRGYNNLGVMYK-EGKGVPKDEKKAVEYFRIATEK-GYT---NAYINLGIMYMEGRGVPSNYAKATECFRKAMHK--GNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSS---RAYEGLSESYRYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNTSSR |
| 2VQ2 Chain:A ((11-216)) | --------------------------------KTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQY----LKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGR----LNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQ----GQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL-------GDADYYFKKYQSRVEVLQADDLLLGWKIAK----ALGNAQAAYEYEAQLQANFPYSEELQTVLT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47724 for 1483 contacts (-32.2/contact) +
2D Compatibility (PS) -21321 + (NN) -14083 + (LL) 2440
1D Compatibility (HY) -1600 + (ID) 1750
Total energy: -84038.0 ( -56.67 by residue)
QMean score : 0.488
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