Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKIFSEDSLEELAQSIKEHGLLQPVLVVSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKIT-SGHAKVLVGLEEEKQELILNSIIGQKLSV-RQTEDLARDFKINANFDNKKHGFKQTQTLIAEDELERFNQSLWDRYKLKAALKGKKIVLRCYKNSLLEAFMKKMMS |
| 1R71 Chain:A ((23-136)) | ------------------------------------------------------------------------------------------------------------------EADQVIENLQRNELTPREIADFIGRELAKG-KKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNELVTAFKKRPEEVEAWLDDDTQEITRGTVKLLREFLDE--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29800 for 741 contacts (-40.2/contact) +
2D Compatibility (PS) -12232 + (NN) -6562 + (LL) 14452
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -39092.0 ( -52.76 by residue)
QMean score : 0.671
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