Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIKACYQNAQALLEGHFLLSSGFHSNYYLQSAKVLEDPKLAEQLALELAKQIQEAHLNIECVCSPAIGGILAGYELARALGVRFIFTERVDNTMTLRRGFEVKKNEKILVCEDIITTGKSAMECAKVLEEKGAQIVAFGALANRGICKRAHSHLKAQEGACLPS-HLPLFALEDFVFDMHKPSSCPLCATSVAIKPGSRGN
3QW4 Chain:B ((261-433))
-ELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRH--YKFDRIAGLPYAALPIASAISNEMNVPLIYPRRE----AAIEG-EYKKGDRVVIIDDLVST-ETKVEAIEKLRSAGLEVVSIVVLVDRDMG----------AKAFLNKLGYDFEAVVGLHQLLPLWRKSNAITSQQEADVRAFLG
General information:
TITO was launched using:
RESULT:
Template:
3QW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106305 for 1276 contacts (-83.3/contact) +
2D Compatibility (PS) -17223 + (NN) -3129 + (LL) 1332
1D Compatibility (HY) -11600 + (ID) 1500
Total energy: -138425.0 ( -108.48 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3QW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QW4-query.scw
PDB file :
Tito_Scwrl_3QW4.pdb
: