Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKSNKKSNHLRAIYRALVIAIGLAVIIVFNY---FNRKNNNARSSRRACS------CFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLK---------------ACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINS-----IKIFNSKPLEAYKARTRLVMLESYTPDFSSPTWYEELQERMQKEYLKHYHELNA |
| 2WTM Chain:A ((2-251)) | GAMYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDF------------VTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYT-KPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHH--LELVTEAVKEFMLEQIAK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56703 for 1724 contacts (-32.9/contact) +
2D Compatibility (PS) -23609 + (NN) -6100 + (LL) 1444
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -93818.0 ( -54.42 by residue)
QMean score : 0.216
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