Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIVLLGALGVLANAEESAAFVGVNYQVSMIQNQTKMVNDNGLQKPLIKFPP-----YAGPGFEVGYKQFFGKKKWFGM-RYYGF-------FDYAH-NRFG--------VMKKGIPV-----GESGFIYNSFSFGGNTL-TERDSYQGQYYINLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAGD-SWATSISK-EIGSYVKHHSNSSYSPANFQFLWKFGVRTHIAIHNSLELGIKVPTITHRLFFITNEKGYTLQADVRRVYAFQISYLRDF |
| 3SPE Chain:A ((7-286)) | -ANPSRLIVAIEIVEDEIPLTKVDGLKARIILIEDNTSEVGTQRVLPGTLVSDKDGSQSLVYPLFEAPV-SFFGKLGDSNGMRVWSTTTADIEEFDEAAMAKFKTRQFRIQLIEKPESPVIVKTADQQDYLNITFDKGVYSDMYNADLYVGDVLVDSYSDDGVVSGLSPLYSPFSQFYVYHENIDLVRQMIYDTE---MRVNPAAAAHTTA---PGEIDFL------TFLAVDGDPYQGIQVLG--------PLDGGITLGKD-GNIYA---SGGTDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42370 for 1602 contacts (-26.4/contact) +
2D Compatibility (PS) -23606 + (NN) -5380 + (LL) 2712
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -79394.0 ( -49.56 by residue)
QMean score : 0.090
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