Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKLIQFLFIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKTKLINAIHAIPNNTN----EKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHI---HIQYYIFKTDAISTEIRDILVEKAKSGVEVRFM-FDGLGSSKLGKAFLAPLKEAGVSIHAFDPIASPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHIKITGQAVIELQESFLNDWVYMENQAGAADGFISESGSKQYFSPVDMGDEWAQVIYGGPYDKEKWVRD-------SMLDLIDSAKESVWIVSPYF------VPDEESLAVIRRVAMSGV--DVRVIIPGKGDRGISFHGSNAYVKTMIEAGAKMYAYADDSFVHAKA-----MLVDGTRAAIGTANFDVRSFRLNHELMVFLYDESEAMH----HLKRDFKKDFEDSRLFTM---KDMENKPLLTRIK--EVLSS-------LLSPIL |
| 2I3O Chain:D ((2-516)) | FRSRPNALSQRSVIASSS-ELASLAGRDILKRGG--NIFDAALAVSALCVTQNNLCG-LGGDLFALIRDENGQID--LNGSGQASRAVSIDYYESGLTKIPERGPYAAITVPGIAGSWDEIFRKFA--TDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQYRGWSSIFPNGSVPVAGEILKQPDLAESFRLSEEGFRSFYDGSLADIIIAGLEGTG----------SPL--SDRDLRVYR--------------PLIGKPVFTDLDEFRIYETSP-NSQGITVIEWIRGESHGYDSRTWEAKIEDIFETEEAYDKRRKITDPSYNIAQ--HDSANGKGLPKRDHNDIGDTTYFSISDSEGRSVSIIQSNYGFGSGIVPKGTGFVLQNRGSYFTLQRDHPNALPGKR----TFHTLAACVEKEHDLYASLGSGGD---IQPQVQQILEILKDNTD---PQAILDKPRWTEPYTI----YEAPGAVYVESEELYRNVSKQISGRKVVLRDVSQEFGTAQITTLIRGDVVVGAADPRGDGIAIPYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189126 for 3904 contacts (-48.4/contact) +
2D Compatibility (PS) -46610 + (NN) 1234 + (LL) 4752
1D Compatibility (HY) -8400 + (ID) 4500
Total energy: -242650.0 ( -62.15 by residue)
QMean score : 0.214
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