Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LATGIGTAKMILCGEHAVVYGEP-AISVPFTQAVVTTNVET-SIKTKFSSAFFSGD--L--D----DMPDFLAGIKALVVDVLNEI---GN-GECVSIHVVSGVP----IGRGLGSSAAVATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYE-RD-RKL--------------EIMHF-------PKKITFVVADTGVPSETRDAVKDVQVLYKENQVEIGKIIHQLGDISREIKTHLEGDADTVKIGAAMNKAQSYLETLT------VSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIAVAKNQEIAEQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN |
| 3K17 Chain:A ((7-359)) | -LQVKIPGKLYVAGEYAVVESGHTAILTAVNRYI-TLTLEDSER-NELWIPHYENPVSWPIGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMVIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFH-TKDEELLYSSIKENRRILQELGTKAGVNIETSLLKELADSAENMG-GAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITEG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128022 for 2657 contacts (-48.2/contact) +
2D Compatibility (PS) -33286 + (NN) -16108 + (LL) 592
1D Compatibility (HY) -8400 + (ID) 3150
Total energy: -188374.0 ( -70.90 by residue)
QMean score : 0.540
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