Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKR-------HKSNPNYGFVGNPFS--KSGWTIYPPALVNQVKKYTGS-AKNMTGTNLAGIKNQLNKKRPVVAWV--------------------SKFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY-----
3ERV Chain:A ((29-228))------------------------------------------------------------------------------------------------------------DEKVILSNVPFIQQLPELDRGCEVTSLAMMLQYAGITVDKMKLANEIKKVDFMNDGVRGNPNEGFVGNIYTFSESGYGVYHGPLFQLAKKYLPNKAVDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQESVYIRDPLKDSLDVKVPREKFEQAWVQMGSQAISYVKRSK


General information:
TITO was launched using:
RESULT:

Template: 3ERV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69064 for 1340 contacts (-51.5/contact) +
2D Compatibility (PS) -18057 + (NN) -9808 + (LL) 6304
1D Compatibility (HY) -14800 + (ID) 3000
Total energy: -108425.0 ( -80.91 by residue)
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_3ERV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ERV-query.scw
PDB file : Tito_Scwrl_3ERV.pdb: