Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFELVSRMPTHQGM-GLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAEL--SYMTFTYKVEALDYIIKDDIDL-LHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDILFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTTKGVVKMSNGENCYASSKLIKSLSL
3W9S Chain:A ((2-117))
--KILVIEDDALLLQGLILAMQSE----GYVCDGVSTAHEAALSLA-----SNHYSLIVLDLGL--PDEDGLHFLSRMRREKMTQPVLILTARDTLEDRISGLD--TGADDYLVKPFALEELNARIRALLR-------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3W9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90310 for 836 contacts (-108.0/contact) +
2D Compatibility (PS) -12275 + (NN) -7216 + (LL) 9916
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -107685.0 ( -128.81 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_3W9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W9S-query.scw
PDB file :
Tito_Scwrl_3W9S.pdb
: