Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITAPRIPDGDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIGMNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDLNKAQFLNCALNGIDLSSCIFESITAMPQDLKGMSIDFSHAPALMPLFGIRVK |
2J8K Chain:A ((15-195)) | --------VPRGS----HMDVEKLRQLYAAGERDFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTILEGG------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2J8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -239522 for 1670 contacts (-143.4/contact) +
2D Compatibility (PS) -17737 + (NN) 6687 + (LL) 2544
1D Compatibility (HY) 0 + (ID) 1950
Total energy: -249978.0 ( -149.69 by residue)
QMean score : 0.206
|
|
|