Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --VDSEMNHDFDLEKQFAFFV-VNFRMSKHDFEEL-TEVEK-NFIM--KEWENKVIFESTM-LRNAVLNAEQNLNR--------------KRNSRFIDLHKKRQKKADVNY---TVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF---- |
| 4Y0C Chain:A ((3-168)) | SLPTANKKPKWS-WRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWS----EVESPGHKILATLGFTDEKSKELESFASESGFLDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 62899 for 910 contacts (69.1/contact) +
2D Compatibility (PS) -13157 + (NN) -3825 + (LL) 408
1D Compatibility (HY) 5200 + (ID) 350
Total energy: 51175.0 ( 56.24 by residue)
QMean score : 0.052
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