Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRG-QGVNAIVVLSHVPALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNG-------------------LVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNT---------RSVTPNADITAVTEDAKSRIEGVINETIGLA-NKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQQYLS--NQTYFLQISGLKYTFTDTDDLDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKAN-LVTAIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 1HP1 Chain:A ((3-500)) | ----------------------------------QDKTYKITVLHTNDHHGHFWRNE-----YGEYGLAAQKTLVDGIRKEVAAEG-----GSVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKW-----------------AKFPLLSANIYQKSTGER--LFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHG-----SNAPGDVEMARAL----PAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMK-M--VNYQLIPVNLKKKRVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNG--RLEGD----RDKVRFVQTNMGRLILAAQMDR-----TGADFAVMSGGGIRDSIE------AGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAK--------DGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160349 for 4247 contacts (-37.8/contact) +
2D Compatibility (PS) -51033 + (NN) -18692 + (LL) 10944
1D Compatibility (HY) -14800 + (ID) 4700
Total energy: -238630.0 ( -56.19 by residue)
QMean score : 0.485
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