Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKNLYNYQEFIRLSHEGKIAYEQIDVPKNASLLTEKIDIDNHIYLVVDGYIALILNDGSQNSKIYSIQGKGTFLNYFTLLDQSNNHFNFKTL--SGCSLYKYSKADMEYFLSMFPE-NFGFQFFIMKNQTTHVYFKSLMASSPASEKLKTTFSNMALLHGVLSDDGTVILPQAIKTSHLLSYSNLSKSCFYKDLQYLKTTNQIEKKEKCWII-HDQALYTMIQNGQTSF------------ |
1OMI Chain:A ((16-248)) | ----GSEFKKYLETNGIKPKQF-----HKKELIFNQW-DPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKI--------TLDNLTMQELSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70266 for 1508 contacts (-46.6/contact) +
2D Compatibility (PS) -21583 + (NN) 342 + (LL) 1392
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -97265.0 ( -64.50 by residue)
QMean score : 0.343
|
|
|