Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPVRKG-KIIDLCSGNGIIPLLLSTRT-E-AQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRIDKEANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYGESE |
| 3TMA Chain:A ((202-321)) | ----------------------------------------------RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL--PRFFPEVDRILANPPHGL----------------KEGLFHLYWDFLRGALALLPPGGRVALLTLRPA------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42962 for 827 contacts (-51.9/contact) +
2D Compatibility (PS) -12175 + (NN) -3653 + (LL) 10020
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -51920.0 ( -62.78 by residue)
QMean score : 0.409
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