Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEI--TTRMTSYHQFTKENKEDNIIQRMLGGEVVALVSDAGMPSISDPGYELVQSALDANIP--------------------VIPLPGANAALTALIASGLAP-QPFYFYGFLPRQN--KERTQAIEKLAAREETWILYESPH-----RLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMKARNLPKREVYSAYHEIK |
| 2ZVB Chain:A ((2-246)) | -------------GELFLVGMGPGDLPGLTQRAREALEGAEVVIGYSTYV--KLLEEMGLLAGKEVVRKGMTEELDRAEEALERALSGQRVALVS-GGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHDTCLISLSDLLTPWPLIERRLHAAGQGDFVVVLYNPQSKRRDWQLRKSAEILLEYRPKETPAALVKSAYRKRQEVALTTLEGLREA----EAGMLTTVVIGNR---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZVB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130107 for 1768 contacts (-73.6/contact) +
2D Compatibility (PS) -24205 + (NN) -17765 + (LL) 6200
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -173477.0 ( -98.12 by residue)
QMean score : 0.526
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